OTS/OTSCPP/OTSClrInterface/ControlClr/OTSControlFunExport.cpp

#include "stdafx.h"
#include "OTSControlFunExport.h"


namespace OTSCLRINTERFACE
{

	
	
	bool COTSControlFunExport::CollectSpectrum(unsigned long a_nMilliseconds, Point a_oPoint, array<unsigned long>^% a_XrayData)
	{

		CPoint pt;
		pt.x = a_oPoint.X;
		pt.y = a_oPoint.Y;

		bool bRet = m_pEDS->CollectSpectrum(a_nMilliseconds, pt);

		DWORD* xrd;
		xrd = m_pEDS->GetXRayData();


		for (int i = 0; i < (int)EDSConst::XANA_CHANNELS; i++)
		{
			a_XrayData[i] = xrd[i];
		}
		return bRet;
	}

	bool COTSControlFunExport::CollectSpectrum(unsigned long a_nMilliseconds, array<unsigned long>^% a_XrayData, unsigned long a_nBufferSize)
	{

		long* aData = new long[a_nBufferSize];
		memset(aData, 0, a_nBufferSize);

		bool bRet = m_pEDS->CollectSpectrum(a_nMilliseconds, aData, a_nBufferSize);
		for (int i = a_nBufferSize; i < (int)a_nBufferSize; i++)
		{
			a_XrayData[i] = aData[i];
		}
		delete[] aData;

		return bRet;
	}

	bool COTSControlFunExport::CollectSpectrum(unsigned long a_nMilliseconds, array<unsigned long>^% a_XrayData)
	{
		bool bRet = m_pEDS->CollectSpectrum(a_nMilliseconds);

		DWORD* xrd;

		xrd = m_pEDS->GetXRayData();

		for (int i = 0; i < (int)EDSConst::XANA_CHANNELS; i++)
		{
			a_XrayData[i] = xrd[i];
		}
		return bRet;
	}
	
	bool COTSControlFunExport::GetXRayByPoints(unsigned long a_nMilliseconds, array<Point>^ points, array<array<unsigned long>^>^% a_XrayData, array<String^>^% a_strEleResult, bool bQuant)
	{
		std::vector<CPosXrayPtr> listXRayPoints;
		for (int i = 0; i < points->Length; i++)
		{
			CPosXrayPtr pXRayPoint = CPosXrayPtr(new CPosXray());
			pXRayPoint->SetPosition(CPoint(points[i].X, points[i].Y));
			listXRayPoints.push_back(pXRayPoint);

		}
		// set get quantify info flag
		if (bQuant)
		{
			m_pEDS->SetQuantification(TRUE);
		}
		else
		{
			m_pEDS->SetQuantification(FALSE);
		}


		bool bRet = m_pEDS->GetXRayByPoints(listXRayPoints, a_nMilliseconds);

		DWORD* xrd;
		for (int i = 0; i < points->Length; i++)
		{


			xrd = listXRayPoints[i]->GetXrayData();
			for (int j = 0; j < (int)EDSConst::XANA_CHANNELS; j++)
			{
				a_XrayData[i][j] = xrd[j];
			}
		
		}
		if (bQuant)
		{
			for (int i = 0; i < points->Length; i++)
			{
				CElementChemistriesList& listElement = listXRayPoints[i]->GetElementQuantifyData();
				int nElementNum = (int)listElement.size();
				CString strElementResult = _T("");
				for (auto pElement : listElement)
				{
					CString strResult;
					CString strName = pElement->GetName();
					double dPercent = pElement->GetPercentage();
					strResult.Format(_T("%s: %f\n"), strName, dPercent);
					strElementResult += strResult;
				}
				a_strEleResult[i] = gcnew String(strElementResult);

			}


		}



		return bRet;
	}
	bool COTSControlFunExport::GetXRayByPoints(unsigned long a_nMilliseconds, array<Point>^ points, array<COTSParticleClr^>^ parts,  bool bQuant)
	{
		std::vector<CPosXrayPtr> listXRayPoints;
		for (int i = 0; i < points->Length; i++)
		{
			CPosXrayPtr pXRayPoint = parts[i]->GetXray()->GetPosXrayPtr();
			pXRayPoint->SetPosition(CPoint(points[i].X, points[i].Y));
			listXRayPoints.push_back(pXRayPoint);

		}
		// set get quantify info flag
		if (bQuant)
		{
			m_pEDS->SetQuantification(TRUE);
		}
		else
		{
			m_pEDS->SetQuantification(FALSE);
		}


		bool bRet = m_pEDS->GetXRayByPoints(listXRayPoints, a_nMilliseconds);

		//DWORD* xrd;
		for (int i = 0; i < points->Length; i++)
		{

			auto part = parts[i]->GetOTSParticlePtr();
			part->SetXrayInfo(listXRayPoints[i]);
		}
		
		return bRet;
	}
	bool COTSControlFunExport::GetXRayByFeatures(unsigned long a_nMilliseconds, array<COTSFeatureClr^>^ features,  array<array<unsigned long>^>^% a_XrayData, array<String^>^% a_strEleResult, bool bQuant)
	{

		std::vector<CPosXrayPtr> listXRayPoints;
		long xraynum = features->Length;
		for (int i = 0; i < xraynum; i++)
		{
			CPosXrayPtr pXRayPoint = CPosXrayPtr(new CPosXray());

			listXRayPoints.push_back(pXRayPoint);
		}
		
		std::vector<BrukerFeature>listFeatures;
		for (int i = 0; i < xraynum; i++)
		{
			auto feature = features[i]->GetOTSFeaturePtr();
			auto otsSegs = feature->GetSegmentsList();
		
			BrukerSegment* segArray = new BrukerSegment[otsSegs.size()];
			for (int j = 0; j < otsSegs.size(); j++)
			{
				auto seg = otsSegs[j];
				
				BrukerSegment* oSegment = &segArray[j];
				oSegment->XCount = seg->GetLength();
				oSegment->XStart = seg->GetStart();
				oSegment->Y = seg->GetHeight();
				
			}
			BrukerFeature oFeature;
			oFeature.SegmentCount = otsSegs.size();
			oFeature.pSegment = segArray;
			listFeatures.push_back(oFeature);
		}
		// set get quantify info flag
		if (bQuant)
		{
			m_pEDS->SetQuantification(TRUE);
		}
		else
		{
			m_pEDS->SetQuantification(FALSE);
		}

		bool bRet = m_pEDS->GetXRayByFeatures(listXRayPoints, listFeatures, a_nMilliseconds);

		DWORD* xrd;
		for (int i = 0; i < xraynum; i++)
		{
			xrd = listXRayPoints[i]->GetXrayData();
			for (int j = 0; j < (int)EDSConst::XANA_CHANNELS; j++)
			{
				a_XrayData[i][j] = xrd[j];
			}
			delete listFeatures[i].pSegment;// here using the pure pointer increase the understandability but bring another problem: you must not forget to free the pointer or you involve into memory leak!
		}

		if (bQuant)
		{
			for (int i = 0; i < features->Length; i++)
			{
				CElementChemistriesList& listElement = listXRayPoints[i]->GetElementQuantifyData();
				int nElementNum = (int)listElement.size();
				CString strElementResult = _T("");
				for (auto pElement : listElement)
				{
					CString strResult;
					CString strName = pElement->GetName();
					double dPercent = pElement->GetPercentage();
					strResult.Format(_T("%s: %f\n"), strName, dPercent);
					strElementResult += strResult;
				}
				a_strEleResult[i] = gcnew String(strElementResult);
			}


		}
		return bRet;
	}
	bool COTSControlFunExport::GetXRayByFeatures(unsigned long a_nMilliseconds, array<COTSParticleClr^>^ parts,  bool bQuant)
	{

		std::vector<CPosXrayPtr> listXRayPoints;
		long xraynum = parts->Length;
		for (int i = 0; i < xraynum; i++)
		{
			

			CPosXrayPtr pXRayPoint = parts[i]->GetXray()->GetPosXrayPtr();
			listXRayPoints.push_back(pXRayPoint);
		}
		
		
		std::vector<BrukerFeature>listFeatures;
		for (int i = 0; i < xraynum; i++)
		{
			auto feature = parts[i]->GetOTSParticlePtr()->GetFeature();
			auto otsSegs = feature->GetSegmentsList();
			
			BrukerSegment* segArray = new BrukerSegment[otsSegs.size()];
			for (int j = 0; j < otsSegs.size(); j++)
			{
				auto seg = otsSegs[j];
			
				BrukerSegment* oSegment = &segArray[j];
				oSegment->XCount = seg->GetLength();
				oSegment->XStart = seg->GetStart();
				oSegment->Y = seg->GetHeight();
			
			}
			BrukerFeature oFeature;
			oFeature.SegmentCount = otsSegs.size();
			oFeature.pSegment = segArray;

			listFeatures.push_back(oFeature);
		}
		// set get quantify info flag
		if (bQuant)
		{
			m_pEDS->SetQuantification(TRUE);
		}
		else
		{
			m_pEDS->SetQuantification(FALSE);
		}

		bool bRet = m_pEDS->GetXRayByFeatures(listXRayPoints, listFeatures, a_nMilliseconds);

		//DWORD* xrd;
		for (int i = 0; i < xraynum; i++)
		{

			auto part = parts[i]->GetOTSParticlePtr();
			part->SetXrayInfo(listXRayPoints[i]);

			delete listFeatures[i].pSegment;// using the pure pointer increase the understandability but bring another problem: you must not forget to free the pointer or you involve into memory leak!
		}

		
		return bRet;
	}
	bool COTSControlFunExport::GetXRayBySinglePoint(unsigned long a_nMilliseconds, Point point, array<unsigned long>^% a_XrayData, String^% a_strEleResult, bool bQuant)
	{

		std::vector<CPosXrayPtr> listXRayPoints;

		CPosXrayPtr pXRayPoint = CPosXrayPtr(new CPosXray());
		pXRayPoint->SetPosition(CPoint(point.X, point.Y));
		listXRayPoints.push_back(pXRayPoint);
		// set get quantify info flag
		if (bQuant)
		{
			m_pEDS->SetQuantification(TRUE);
		}
		else
		{
			m_pEDS->SetQuantification(FALSE);
		}
		bool bRet = m_pEDS->GetXRayByPoints(listXRayPoints, a_nMilliseconds);

		DWORD* xrd;
		xrd = listXRayPoints[0]->GetXrayData();
		for (int j = 0; j < (int)EDSConst::XANA_CHANNELS; j++)
		{
			a_XrayData[j] = xrd[j];
		}
		if (bQuant)
		{

			CElementChemistriesList& listElement = listXRayPoints[0]->GetElementQuantifyData();
			int nElementNum = (int)listElement.size();
			CString strElementResult = _T("");
			for (auto pElement : listElement)
			{
				CString strResult;
				CString strName = pElement->GetName();
				double dPercent = pElement->GetPercentage();
				strResult.Format(_T("%s: %f\n"), strName, dPercent);
				strElementResult += strResult;
			}
			a_strEleResult = gcnew String(strElementResult);



		}
		return bRet;
	}
	bool COTSControlFunExport::GetXRayBySingleFeature(unsigned long a_nMilliseconds, COTSFeatureClr^ feature, array<unsigned long>^% a_XrayData, String^% a_strEleResult, bool bQuant)

	{

		std::vector<CPosXrayPtr> listXRayPoints;
		CPosXrayPtr pXRayPoint = CPosXrayPtr(new CPosXray());

		listXRayPoints.push_back(pXRayPoint);

		std::vector<BrukerSegment> listSegment;
		std::vector<BrukerFeature>listFeatures;

		auto otsSegs = feature->GetSegmentsList();
		for (int j = 0; j < otsSegs->Count; j++)
		{
			auto seg = otsSegs[j];
			BrukerSegment oSegment;
			oSegment.XCount = seg->GetLength();
			oSegment.XStart = seg->GetStart();
			oSegment.Y = seg->GetHeight();
			listSegment.push_back(oSegment);
		}
		BrukerFeature ofeature;
		ofeature.SegmentCount = listSegment.size();
		ofeature.pSegment = &listSegment[0];
		listFeatures.push_back(ofeature);

		bool bRet = FALSE;

		// set get quantify info flag
		if (bQuant)
		{
			m_pEDS->SetQuantification(TRUE);
		}
		else
		{
			m_pEDS->SetQuantification(FALSE);
		}

		bRet = m_pEDS->GetXRayByFeatures(listXRayPoints, listFeatures, a_nMilliseconds);

		DWORD* xrd;

		pXRayPoint = listXRayPoints[0];
		xrd = pXRayPoint->GetXrayData();

		for (int i = 0; i < (int)EDSConst::XANA_CHANNELS; i++)
		{
			a_XrayData[i] = xrd[i];
		}
		if (bQuant)
		{

			CElementChemistriesList& listElement = listXRayPoints[0]->GetElementQuantifyData();
			int nElementNum = (int)listElement.size();
			CString strElementResult = _T("");
			for (auto pElement : listElement)
			{
				CString strResult;
				CString strName = pElement->GetName();
				double dPercent = pElement->GetPercentage();
				strResult.Format(_T("%s: %f\n"), strName, dPercent);
				strElementResult += strResult;
			}
			a_strEleResult = gcnew String(strElementResult);



		}
		return bRet;
	}
	bool COTSControlFunExport::GetXRayElements(unsigned long a_nMilliseconds, array<unsigned long>^% a_XrayData, int^% a_nElementNum, String^% a_strResult)
	{

		std::vector<CPosXrayPtr> listXRayPoints;
		CPosXrayPtr pXRayPoint = CPosXrayPtr(new CPosXray());
		pXRayPoint->SetPosition(CPoint(10, 10));
		listXRayPoints.push_back(pXRayPoint);

		CPosXrayPtr pXRayPoint1 = CPosXrayPtr(new CPosXray());
		pXRayPoint1->SetPosition(CPoint(20, 20));
		listXRayPoints.push_back(pXRayPoint1);


		// set get quantify info flag
		m_pEDS->SetQuantification(TRUE);

		bool bRet = m_pEDS->GetXRayByPoints(listXRayPoints, a_nMilliseconds);

		DWORD* xrd;

		pXRayPoint = listXRayPoints[1];

		xrd = pXRayPoint->GetXrayData();

		// element quantify data 
		CElementChemistriesList& listElement = listXRayPoints[1]->GetElementQuantifyData();
		int nElementNum = (int)listElement.size();
		CString strElementResult = _T("");
		for (auto pElement : listElement)
		{
			CString strResult;
			CString strName = pElement->GetName();
			double dPercent = pElement->GetPercentage();
			strResult.Format(_T("%s: %f\n"), strName, dPercent);
			strElementResult += strResult;
		}
		for (int i = 0; i < (int)EDSConst::XANA_CHANNELS; i++)
		{
			a_XrayData[i] = xrd[i];
		}

		a_nElementNum = nElementNum;
		a_strResult = gcnew String(strElementResult);
		return bRet;
	}
	bool COTSControlFunExport::GetXRayAndElements(unsigned long a_nMilliseconds, int a_BSEX, int a_BSEY, array<unsigned long>^% a_XrayData, int^% a_nElementNum, String^% a_strResult)
	{
		std::vector<CPosXrayPtr> listXRayPoints;
		CPosXrayPtr pXRayPoint = CPosXrayPtr(new CPosXray());
		pXRayPoint->SetPosition(CPoint(a_BSEX, a_BSEY));
		listXRayPoints.push_back(pXRayPoint);

		/*CPosXrayPtr pXRayPoint1 = CPosXrayPtr(new CPosXray());
		pXRayPoint1->SetPosition(CPoint(a_BSEX, a_BSEY));
		listXRayPoints.push_back(pXRayPoint1);*/


		// set get quantify info flag
		//m_pEDS->SetQuantification(FALSE);
		m_pEDS->SetQuantification(TRUE);
		bool bRet = m_pEDS->GetXRayByPoints(listXRayPoints, a_nMilliseconds);

		/*std::vector<CPosXrayPtr> listXRayPointsTemp;
		CPosXrayPtr pXRayPointTemp = CPosXrayPtr(new CPosXray());
		listXRayPointsTemp.push_back(pXRayPointTemp);

		for (int i = 0; i < 2; i++)
		{
			listXRayPointsTemp[0] = listXRayPoints[i];

			m_pEDS->SetQuantification(TRUE);
			bool bRet = m_pEDS->GetXRayByPoints(listXRayPointsTemp, a_nMilliseconds);

			listXRayPoints[i] = listXRayPointsTemp[0];
		}*/

		DWORD* xrd;

		pXRayPoint = listXRayPoints[0];

		xrd = pXRayPoint->GetXrayData();

		// element quantify data 
		CElementChemistriesList& listElement = listXRayPoints[0]->GetElementQuantifyData();
		int nElementNum = (int)listElement.size();
		CString strElementResult = _T("");
		for (auto pElement : listElement)
		{
			CString strResult;
			CString strName = pElement->GetName();
			double dPercent = pElement->GetPercentage();
			strResult.Format(_T("%s: %f\n"), strName, dPercent);
			strElementResult += strResult;
		}

		for (int i = 0; i < (int)EDSConst::XANA_CHANNELS; i++)
		{
			a_XrayData[i] = xrd[i];
		}

		a_nElementNum = nElementNum;
		a_strResult = gcnew String(strElementResult);
		return bRet;
	}
	int  COTSControlFunExport::AcquireBSEImage(int a_nMatrixIndex, int nReads, int nDwell, array<System::Byte>^% a_ImgData)
	{
		int bRet = 0;

		CSize sz;
		int height, width;

		CBSEImgPtr pbseImg = nullptr;

		pbseImg = m_pScan->AcquireBSEImage(a_nMatrixIndex, nReads, nDwell);
		if (pbseImg == nullptr)
		{
			return bRet;
		}
		sz = pbseImg->GetImageSize();
		height = sz.cx;
		width = sz.cy;

		bRet = height * width;

		BYTE* lpData = pbseImg->GetImageDataPointer();


		for (int i = 0; i < bRet; i++)
		{
			a_ImgData[i] = lpData[i];
		}

		return bRet;

	}

}